Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.78■□□□□ 0.6
Pspc1Q8R326 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pspc1Q8R326 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Haglr-201ENSMUST00000100000 2085 ntBASIC18.77■□□□□ 0.6
Pspc1Q8R326 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.77■□□□□ 0.6
Pspc1Q8R326 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pspc1Q8R326 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pspc1Q8R326 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pspc1Q8R326 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pspc1Q8R326 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.76■□□□□ 0.59
Pspc1Q8R326 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.76■□□□□ 0.59
Pspc1Q8R326 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pspc1Q8R326 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Rps4l-201ENSMUST00000071745 943 ntBASIC18.75■□□□□ 0.59
Pspc1Q8R326 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.75■□□□□ 0.59
Pspc1Q8R326 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pspc1Q8R326 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Gm18195-201ENSMUST00000207604 706 ntBASIC18.74■□□□□ 0.59
Pspc1Q8R326 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.74■□□□□ 0.59
Pspc1Q8R326 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.74■□□□□ 0.59
Pspc1Q8R326 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pspc1Q8R326 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pspc1Q8R326 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pspc1Q8R326 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Pspc1Q8R326 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pspc1Q8R326 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pspc1Q8R326 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms