Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nudcd3Q8R1N4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Gm9731-201ENSMUST00000209480 747 ntBASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nudcd3Q8R1N4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nudcd3Q8R1N4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Nudcd3Q8R1N4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nudcd3Q8R1N4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.38■□□□□ 0.21
Nudcd3Q8R1N4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms