Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp40Q8R1F9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp40Q8R1F9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rpp40Q8R1F9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp40Q8R1F9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Gm12895-201ENSMUST00000122214 226 ntBASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Gm17971-201ENSMUST00000190239 806 ntBASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.5■□□□□ 0.39
Rpp40Q8R1F9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rpp40Q8R1F9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.48■□□□□ 0.39
Rpp40Q8R1F9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 186 ms