Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cchcr1Q8K2I2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Gm18421-201ENSMUST00000204122 625 ntBASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cchcr1Q8K2I2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Gm29707-201ENSMUST00000196325 491 ntBASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cchcr1Q8K2I2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Gm11336-201ENSMUST00000118168 334 ntBASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Mir1668-201ENSMUST00000184114 107 ntBASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cchcr1Q8K2I2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
Cchcr1Q8K2I2 Gm13559-201ENSMUST00000120476 863 ntBASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms