Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Gm11336-201ENSMUST00000118168 334 ntBASIC18.74■□□□□ 0.59
Smc2Q8CG48 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Gm7889-201ENSMUST00000185591 958 ntBASIC18.74■□□□□ 0.59
Smc2Q8CG48 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.74■□□□□ 0.59
Smc2Q8CG48 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc2Q8CG48 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.73■□□□□ 0.59
Smc2Q8CG48 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.73■□□□□ 0.59
Smc2Q8CG48 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc2Q8CG48 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Gm26039-201ENSMUST00000158152 144 ntBASIC18.72■□□□□ 0.59
Smc2Q8CG48 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Gm18421-201ENSMUST00000204122 625 ntBASIC18.72■□□□□ 0.59
Smc2Q8CG48 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc2Q8CG48 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.72■□□□□ 0.59
Smc2Q8CG48 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smc2Q8CG48 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.71■□□□□ 0.59
Smc2Q8CG48 Gm29707-201ENSMUST00000196325 491 ntBASIC18.71■□□□□ 0.59
Smc2Q8CG48 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Gm10566-201ENSMUST00000086739 996 ntBASIC18.71■□□□□ 0.59
Smc2Q8CG48 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smc2Q8CG48 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc2Q8CG48 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc2Q8CG48 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.71■□□□□ 0.58
Smc2Q8CG48 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smc2Q8CG48 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.7■□□□□ 0.58
Smc2Q8CG48 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.7■□□□□ 0.58
Smc2Q8CG48 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smc2Q8CG48 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms