Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.32■□□□□ 0.04
Cpne1Q8C166 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.32■□□□□ 0.04
Cpne1Q8C166 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Gm9013-201ENSMUST00000132939 882 ntBASIC15.31■□□□□ 0.04
Cpne1Q8C166 Gm7977-201ENSMUST00000193787 748 ntBASIC15.31■□□□□ 0.04
Cpne1Q8C166 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.31■□□□□ 0.04
Cpne1Q8C166 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.31■□□□□ 0.04
Cpne1Q8C166 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cpne1Q8C166 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 AA414768-201ENSMUST00000121924 1257 ntBASIC15.3■□□□□ 0.04
Cpne1Q8C166 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Gm5587-201ENSMUST00000206270 674 ntBASIC15.3■□□□□ 0.04
Cpne1Q8C166 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpne1Q8C166 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.29■□□□□ 0.04
Cpne1Q8C166 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Gm29707-201ENSMUST00000196325 491 ntBASIC15.29■□□□□ 0.04
Cpne1Q8C166 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpne1Q8C166 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne1Q8C166 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpne1Q8C166 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne1Q8C166 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms