Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.85□□□□□ -0.35
Chd9Q8BYH8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Gm22175-201ENSMUST00000175007 78 ntBASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Gm25948-201ENSMUST00000175334 112 ntBASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chd9Q8BYH8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd9Q8BYH8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.83□□□□□ -0.35
Chd9Q8BYH8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd9Q8BYH8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Chd9Q8BYH8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.83□□□□□ -0.35
Chd9Q8BYH8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Mir1895-201ENSMUST00000122615 79 ntBASIC12.83□□□□□ -0.36
Chd9Q8BYH8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chd9Q8BYH8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Gm7506-201ENSMUST00000207758 815 ntBASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd9Q8BYH8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gm43474-201ENSMUST00000196415 774 ntBASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd9Q8BYH8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms