Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sfr1Q8BP27 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Gm29518-201ENSMUST00000190858 372 ntBASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sfr1Q8BP27 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.64■□□□□ 0.26
Sfr1Q8BP27 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Gm11950-201ENSMUST00000121615 838 ntBASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Gm17808-201ENSMUST00000200859 894 ntBASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sfr1Q8BP27 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sfr1Q8BP27 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sfr1Q8BP27 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms