Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Gm7213-201ENSMUST00000215977 950 ntBASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Depdc1bQ8BH88 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Depdc1bQ8BH88 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm9013-201ENSMUST00000132939 882 ntBASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm5587-201ENSMUST00000206270 674 ntBASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.79■□□□□ 0.44
Depdc1bQ8BH88 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Depdc1bQ8BH88 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.77■□□□□ 0.44
Depdc1bQ8BH88 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms