Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc5a7Q8BGY9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Rab3c-203ENSMUST00000224180 967 ntBASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc5a7Q8BGY9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 App-207ENSMUST00000227737 2827 ntBASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 AV356131-201ENSMUST00000206201 750 ntBASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.38□□□□□ -0.11
Slc5a7Q8BGY9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Gm24841-201ENSMUST00000158676 357 ntBASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Gm17661-201ENSMUST00000170317 270 ntBASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Gm27000-201ENSMUST00000182943 842 ntBASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Slc5a7Q8BGY9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc5a7Q8BGY9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms