Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.15■□□□□ 0.18
Ubp1Q811S7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ubp1Q811S7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Gm29518-201ENSMUST00000190858 372 ntBASIC16.14■□□□□ 0.17
Ubp1Q811S7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ubp1Q811S7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Gm17808-201ENSMUST00000200859 894 ntBASIC16.13■□□□□ 0.17
Ubp1Q811S7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ubp1Q811S7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ubp1Q811S7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ubp1Q811S7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ubp1Q811S7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms