Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Auts2-212ENSMUST00000178555 309 ntBASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38bQ80SY5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Gm7862-201ENSMUST00000121461 292 ntBASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38bQ80SY5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Gm11779-201ENSMUST00000118541 368 ntBASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38bQ80SY5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Gm5364-201ENSMUST00000216789 889 ntBASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38bQ80SY5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms