Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ssx9Q6XAS3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
Ssx9Q6XAS3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssx9Q6XAS3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssx9Q6XAS3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ssx9Q6XAS3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms