Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc1Q6TDU8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Gm45058-201ENSMUST00000205810 766 ntBASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Casc1Q6TDU8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casc1Q6TDU8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casc1Q6TDU8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casc1Q6TDU8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Mir5130-201ENSMUST00000175160 84 ntBASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Casc1Q6TDU8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.52■□□□□ 0.72
Casc1Q6TDU8 Gm16061-201ENSMUST00000122167 857 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms