Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sp140Q6NSQ5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sp140Q6NSQ5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sp140Q6NSQ5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sp140Q6NSQ5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sp140Q6NSQ5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms