Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tgfbr1Q64729 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Gm12441-201ENSMUST00000121806 588 ntBASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Gm17661-201ENSMUST00000170317 270 ntBASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tgfbr1Q64729 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Gm37025-201ENSMUST00000195159 829 ntBASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Tgfbr1Q64729 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Gm12085-201ENSMUST00000119263 940 ntBASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tgfbr1Q64729 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tgfbr1Q64729 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Tgfbr1Q64729 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tgfbr1Q64729 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.39□□□□□ -0.27
Tgfbr1Q64729 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tgfbr1Q64729 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms