Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.18■□□□□ 0.66
Scn9aQ62205 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scn9aQ62205 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Scn9aQ62205 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Scn9aQ62205 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn9aQ62205 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn9aQ62205 Gm5312-201ENSMUST00000203728 547 ntBASIC19.17■□□□□ 0.66
Scn9aQ62205 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.17■□□□□ 0.66
Scn9aQ62205 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn9aQ62205 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Scn9aQ62205 Gm13597-201ENSMUST00000121239 375 ntBASIC19.17■□□□□ 0.66
Scn9aQ62205 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn9aQ62205 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.17■□□□□ 0.66
Scn9aQ62205 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn9aQ62205 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.17■□□□□ 0.66
Scn9aQ62205 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.16■□□□□ 0.66
Scn9aQ62205 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scn9aQ62205 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn9aQ62205 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 AA543401-201ENSMUST00000164248 1269 ntBASIC19.15■□□□□ 0.66
Scn9aQ62205 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Scn9aQ62205 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.15■□□□□ 0.66
Scn9aQ62205 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Scn9aQ62205 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Scn9aQ62205 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Rarb-207ENSMUST00000225921 2756 ntBASIC19.15■□□□□ 0.66
Scn9aQ62205 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn9aQ62205 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.15■□□□□ 0.66
Scn9aQ62205 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.15■□□□□ 0.66
Scn9aQ62205 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn9aQ62205 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scn9aQ62205 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.15■□□□□ 0.66
Scn9aQ62205 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.14■□□□□ 0.66
Scn9aQ62205 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn9aQ62205 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn9aQ62205 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn9aQ62205 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn9aQ62205 Gm44492-201ENSMUST00000197012 141 ntBASIC19.14■□□□□ 0.65
Scn9aQ62205 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scn9aQ62205 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn9aQ62205 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn9aQ62205 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn9aQ62205 Gm45167-201ENSMUST00000208007 322 ntBASIC19.13■□□□□ 0.65
Scn9aQ62205 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Scn9aQ62205 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Gm4899-201ENSMUST00000178708 719 ntBASIC19.13■□□□□ 0.65
Scn9aQ62205 Gm8825-201ENSMUST00000182565 998 ntBASIC19.13■□□□□ 0.65
Scn9aQ62205 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn9aQ62205 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn9aQ62205 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms