Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ctr9Q62018 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ctr9Q62018 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Ctr9Q62018 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ctr9Q62018 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctr9Q62018 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.25■□□□□ 0.67
Ctr9Q62018 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Ctr9Q62018 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Ctr9Q62018 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.25■□□□□ 0.67
Ctr9Q62018 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ctr9Q62018 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ctr9Q62018 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctr9Q62018 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.24■□□□□ 0.67
Ctr9Q62018 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctr9Q62018 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ctr9Q62018 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.23■□□□□ 0.67
Ctr9Q62018 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ctr9Q62018 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.23■□□□□ 0.67
Ctr9Q62018 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ctr9Q62018 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.23■□□□□ 0.67
Ctr9Q62018 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Ctr9Q62018 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctr9Q62018 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm24589-201ENSMUST00000116692 94 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm7153-201ENSMUST00000117092 455 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm15372-201ENSMUST00000120729 834 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm36967-201ENSMUST00000193814 266 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Birc2-201ENSMUST00000054878 378 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ctr9Q62018 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctr9Q62018 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.22■□□□□ 0.67
Ctr9Q62018 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctr9Q62018 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ctr9Q62018 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms