Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox17Q61473 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox17Q61473 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox17Q61473 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox17Q61473 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sox17Q61473 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox17Q61473 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.43■□□□□ 0.06
Sox17Q61473 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox17Q61473 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Sox17Q61473 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sox17Q61473 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sox17Q61473 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sox17Q61473 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.42■□□□□ 0.06
Sox17Q61473 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.42■□□□□ 0.06
Sox17Q61473 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Sox17Q61473 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sox17Q61473 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox17Q61473 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sox17Q61473 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sox17Q61473 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.41■□□□□ 0.06
Sox17Q61473 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.41■□□□□ 0.06
Sox17Q61473 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.41■□□□□ 0.06
Sox17Q61473 Gm13158-201ENSMUST00000122007 736 ntBASIC15.41■□□□□ 0.06
Sox17Q61473 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.41■□□□□ 0.06
Sox17Q61473 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox17Q61473 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.41■□□□□ 0.06
Sox17Q61473 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox17Q61473 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Gm18284-201ENSMUST00000172604 624 ntBASIC15.4■□□□□ 0.06
Sox17Q61473 Gm27275-201ENSMUST00000184318 272 ntBASIC15.4■□□□□ 0.06
Sox17Q61473 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox17Q61473 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox17Q61473 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox17Q61473 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sox17Q61473 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.39■□□□□ 0.05
Sox17Q61473 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.39■□□□□ 0.05
Sox17Q61473 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.39■□□□□ 0.05
Sox17Q61473 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.39■□□□□ 0.05
Sox17Q61473 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.39■□□□□ 0.05
Sox17Q61473 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sox17Q61473 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sox17Q61473 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox17Q61473 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sox17Q61473 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox17Q61473 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox17Q61473 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox17Q61473 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sox17Q61473 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms