Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ift88Q61371 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ift88Q61371 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ift88Q61371 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.13■□□□□ 0.49
Ift88Q61371 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.13■□□□□ 0.49
Ift88Q61371 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.13■□□□□ 0.49
Ift88Q61371 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ift88Q61371 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ift88Q61371 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.12■□□□□ 0.49
Ift88Q61371 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Ift88Q61371 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Phf7-203ENSMUST00000226565 1971 ntBASIC18.12■□□□□ 0.49
Ift88Q61371 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.12■□□□□ 0.49
Ift88Q61371 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.12■□□□□ 0.49
Ift88Q61371 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.12■□□□□ 0.49
Ift88Q61371 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ift88Q61371 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.12■□□□□ 0.49
Ift88Q61371 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.12■□□□□ 0.49
Ift88Q61371 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ift88Q61371 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ift88Q61371 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ift88Q61371 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ift88Q61371 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.11■□□□□ 0.49
Ift88Q61371 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.11■□□□□ 0.49
Ift88Q61371 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Gm29257-201ENSMUST00000186115 639 ntBASIC18.11■□□□□ 0.49
Ift88Q61371 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.11■□□□□ 0.49
Ift88Q61371 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ift88Q61371 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ift88Q61371 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ift88Q61371 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.1■□□□□ 0.49
Ift88Q61371 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Ift88Q61371 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.1■□□□□ 0.49
Ift88Q61371 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.1■□□□□ 0.49
Ift88Q61371 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.1■□□□□ 0.49
Ift88Q61371 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ift88Q61371 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.1■□□□□ 0.49
Ift88Q61371 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ift88Q61371 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ift88Q61371 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Ift88Q61371 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ift88Q61371 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Ift88Q61371 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ift88Q61371 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms