Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six4Q61321 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six4Q61321 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Six4Q61321 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.53■□□□□ 0.24
Six4Q61321 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Six4Q61321 Gm27704-201ENSMUST00000185094 107 ntBASIC16.53■□□□□ 0.24
Six4Q61321 Gm44430-201ENSMUST00000203376 995 ntBASIC16.53■□□□□ 0.24
Six4Q61321 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.53■□□□□ 0.24
Six4Q61321 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Six4Q61321 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Six4Q61321 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.52■□□□□ 0.24
Six4Q61321 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.52■□□□□ 0.24
Six4Q61321 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Olfr129-201ENSMUST00000122318 993 ntBASIC16.52■□□□□ 0.24
Six4Q61321 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Six4Q61321 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six4Q61321 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six4Q61321 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six4Q61321 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six4Q61321 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.52■□□□□ 0.23
Six4Q61321 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Six4Q61321 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six4Q61321 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.52■□□□□ 0.23
Six4Q61321 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six4Q61321 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.51■□□□□ 0.23
Six4Q61321 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.51■□□□□ 0.23
Six4Q61321 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.51■□□□□ 0.23
Six4Q61321 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Six4Q61321 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Six4Q61321 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Six4Q61321 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six4Q61321 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.5■□□□□ 0.23
Six4Q61321 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Gm27742-201ENSMUST00000184667 60 ntBASIC16.5■□□□□ 0.23
Six4Q61321 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
Six4Q61321 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.5■□□□□ 0.23
Six4Q61321 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Six4Q61321 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six4Q61321 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six4Q61321 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms