Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.06□□□□□ -0.16
Clns1aQ61189 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.06□□□□□ -0.16
Clns1aQ61189 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.06□□□□□ -0.16
Clns1aQ61189 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.06□□□□□ -0.16
Clns1aQ61189 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.06□□□□□ -0.16
Clns1aQ61189 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Clns1aQ61189 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Gm5874-201ENSMUST00000096101 508 ntBASIC14.06□□□□□ -0.16
Clns1aQ61189 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clns1aQ61189 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.05□□□□□ -0.16
Clns1aQ61189 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.05□□□□□ -0.16
Clns1aQ61189 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.05□□□□□ -0.16
Clns1aQ61189 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clns1aQ61189 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Rab3c-203ENSMUST00000224180 967 ntBASIC14.04□□□□□ -0.16
Clns1aQ61189 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clns1aQ61189 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.04□□□□□ -0.16
Clns1aQ61189 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clns1aQ61189 Prob1-201ENSMUST00000097619 3021 ntBASIC14.04□□□□□ -0.16
Clns1aQ61189 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Clns1aQ61189 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms