Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sdf4Q61112 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.6■□□□□ 0.25
Sdf4Q61112 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.6■□□□□ 0.25
Sdf4Q61112 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.6■□□□□ 0.25
Sdf4Q61112 Gm5587-201ENSMUST00000206270 674 ntBASIC16.6■□□□□ 0.25
Sdf4Q61112 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.6■□□□□ 0.25
Sdf4Q61112 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.6■□□□□ 0.25
Sdf4Q61112 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sdf4Q61112 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sdf4Q61112 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Sdf4Q61112 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Gm25016-201ENSMUST00000158399 131 ntBASIC16.59■□□□□ 0.25
Sdf4Q61112 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sdf4Q61112 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Sdf4Q61112 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sdf4Q61112 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sdf4Q61112 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdf4Q61112 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdf4Q61112 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdf4Q61112 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Sdf4Q61112 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Sdf4Q61112 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sdf4Q61112 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.58■□□□□ 0.25
Sdf4Q61112 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Sdf4Q61112 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sdf4Q61112 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sdf4Q61112 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sdf4Q61112 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sdf4Q61112 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sdf4Q61112 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sdf4Q61112 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sdf4Q61112 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.57■□□□□ 0.24
Sdf4Q61112 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.57■□□□□ 0.24
Sdf4Q61112 Gm6659-201ENSMUST00000174752 547 ntBASIC16.57■□□□□ 0.24
Sdf4Q61112 Gm23634-201ENSMUST00000175071 91 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms