Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubr3Q5U430 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.77■□□□□ 0.76
Ubr3Q5U430 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubr3Q5U430 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.76■□□□□ 0.75
Ubr3Q5U430 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ubr3Q5U430 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.75■□□□□ 0.75
Ubr3Q5U430 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Gm7787-201ENSMUST00000216858 688 ntBASIC19.75■□□□□ 0.75
Ubr3Q5U430 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubr3Q5U430 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ubr3Q5U430 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr3Q5U430 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr3Q5U430 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Gm43474-201ENSMUST00000196415 774 ntBASIC19.73■□□□□ 0.75
Ubr3Q5U430 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.73■□□□□ 0.75
Ubr3Q5U430 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Gm15358-201ENSMUST00000119249 520 ntBASIC19.73■□□□□ 0.75
Ubr3Q5U430 Mir7023-201ENSMUST00000185093 64 ntBASIC19.73■□□□□ 0.75
Ubr3Q5U430 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ubr3Q5U430 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.72■□□□□ 0.75
Ubr3Q5U430 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ubr3Q5U430 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr3Q5U430 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms