Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav7d-4Q5R1H9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Flg-201ENSMUST00000050758 1488 ntBASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-4Q5R1H9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.52□□□□□ -0.4
Trav7d-4Q5R1H9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-4Q5R1H9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Gm27454-201ENSMUST00000185090 204 ntBASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-4Q5R1H9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms