Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trdv2-2Q5R1A4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Gm24841-201ENSMUST00000158676 357 ntBASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trdv2-2Q5R1A4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trdv2-2Q5R1A4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trdv2-2Q5R1A4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms