Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.06■□□□□ 0.64
Prpf38aQ4FK66 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Gm25745-201ENSMUST00000174945 133 ntBASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Rps4l-201ENSMUST00000071745 943 ntBASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Prpf38aQ4FK66 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Gm44771-201ENSMUST00000206975 626 ntBASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38aQ4FK66 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Gm6296-201ENSMUST00000222599 943 ntBASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38aQ4FK66 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prpf38aQ4FK66 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38aQ4FK66 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms