Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Gm27459-201ENSMUST00000184860 107 ntBASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Gm28659-201ENSMUST00000188013 759 ntBASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Mzt1-203ENSMUST00000227948 952 ntBASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smcr8Q3UMB5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Haglr-201ENSMUST00000100000 2085 ntBASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smcr8Q3UMB5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Gm5864-201ENSMUST00000202263 970 ntBASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smcr8Q3UMB5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.54■□□□□ 0.4
Smcr8Q3UMB5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms