Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.46■□□□□ 0.71
Spg7Q3ULF4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Spg7Q3ULF4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 AW822252-206ENSMUST00000208904 237 ntBASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Gm10060-201ENSMUST00000212002 111 ntBASIC19.45■□□□□ 0.7
Spg7Q3ULF4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.45■□□□□ 0.7
Spg7Q3ULF4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Spg7Q3ULF4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Spg7Q3ULF4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Gm12497-201ENSMUST00000138778 237 ntBASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Spg7Q3ULF4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Mir5131-201ENSMUST00000175426 93 ntBASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Gm4535-201ENSMUST00000182274 558 ntBASIC19.42■□□□□ 0.7
Spg7Q3ULF4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Gm9172-201ENSMUST00000212092 954 ntBASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Gm10355-201ENSMUST00000097146 517 ntBASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Spg7Q3ULF4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spg7Q3ULF4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms