Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Gm24589-201ENSMUST00000116692 94 ntBASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Khdc4Q3TCX3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Khdc4Q3TCX3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Khdc4Q3TCX3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Gm11336-201ENSMUST00000118168 334 ntBASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Khdc4Q3TCX3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Khdc4Q3TCX3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Khdc4Q3TCX3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Khdc4Q3TCX3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Khdc4Q3TCX3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Khdc4Q3TCX3 Haglr-201ENSMUST00000100000 2085 ntBASIC15.52■□□□□ 0.08
Khdc4Q3TCX3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms