Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cacna1aP97445 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.07■□□□□ 0
Cacna1aP97445 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Chchd1-203ENSMUST00000224633 557 ntBASIC15.07■□□□□ 0
Cacna1aP97445 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cacna1aP97445 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cacna1aP97445 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.07■□□□□ 0
Cacna1aP97445 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Cacna1aP97445 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.07■□□□□ 0
Cacna1aP97445 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.07■□□□□ 0
Cacna1aP97445 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.07■□□□□ 0
Cacna1aP97445 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.07■□□□□ 0
Cacna1aP97445 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cacna1aP97445 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cacna1aP97445 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.06■□□□□ 0
Cacna1aP97445 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.06■□□□□ 0
Cacna1aP97445 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Cacna1aP97445 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cacna1aP97445 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.06■□□□□ 0
Cacna1aP97445 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cacna1aP97445 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.06■□□□□ 0
Cacna1aP97445 Mir6956-201ENSMUST00000183598 62 ntBASIC15.06■□□□□ 0
Cacna1aP97445 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Cacna1aP97445 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cacna1aP97445 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1aP97445 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1aP97445 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1aP97445 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.05■□□□□ 0
Cacna1aP97445 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
Cacna1aP97445 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.05■□□□□ 0
Cacna1aP97445 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.05■□□□□ 0
Cacna1aP97445 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1aP97445 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cacna1aP97445 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.05■□□□□ -0
Cacna1aP97445 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1aP97445 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cacna1aP97445 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.04■□□□□ -0
Cacna1aP97445 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cacna1aP97445 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.04■□□□□ -0
Cacna1aP97445 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 AV026068-213ENSMUST00000223675 1171 ntBASIC15.04■□□□□ -0
Cacna1aP97445 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cacna1aP97445 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.04■□□□□ -0
Cacna1aP97445 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1aP97445 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms