Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PrkdcP97313 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.17□□□□□ -0.62
PrkdcP97313 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.17□□□□□ -0.62
PrkdcP97313 Gm18622-201ENSMUST00000219361 595 ntBASIC11.17□□□□□ -0.62
PrkdcP97313 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC11.17□□□□□ -0.62
PrkdcP97313 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.17□□□□□ -0.62
PrkdcP97313 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.17□□□□□ -0.62
PrkdcP97313 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC11.17□□□□□ -0.62
PrkdcP97313 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
PrkdcP97313 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PrkdcP97313 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
PrkdcP97313 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm14719-201ENSMUST00000121891 340 ntBASIC11.16□□□□□ -0.62
PrkdcP97313 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.16□□□□□ -0.62
PrkdcP97313 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.16□□□□□ -0.62
PrkdcP97313 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.16□□□□□ -0.62
PrkdcP97313 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
PrkdcP97313 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.16□□□□□ -0.62
PrkdcP97313 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
PrkdcP97313 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
PrkdcP97313 Gm10253-201ENSMUST00000194270 940 ntBASIC11.16□□□□□ -0.62
PrkdcP97313 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.16□□□□□ -0.62
PrkdcP97313 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.16□□□□□ -0.62
PrkdcP97313 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
PrkdcP97313 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PrkdcP97313 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
PrkdcP97313 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC11.15□□□□□ -0.62
PrkdcP97313 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PrkdcP97313 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.15□□□□□ -0.62
PrkdcP97313 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
PrkdcP97313 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PrkdcP97313 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
PrkdcP97313 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
PrkdcP97313 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PrkdcP97313 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.15□□□□□ -0.62
PrkdcP97313 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PrkdcP97313 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
PrkdcP97313 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PrkdcP97313 AC123834.2-201ENSMUST00000224038 2340 ntBASIC11.15□□□□□ -0.62
PrkdcP97313 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
PrkdcP97313 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
PrkdcP97313 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
PrkdcP97313 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PrkdcP97313 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
PrkdcP97313 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.14□□□□□ -0.63
PrkdcP97313 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
PrkdcP97313 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
PrkdcP97313 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
PrkdcP97313 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PrkdcP97313 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.14□□□□□ -0.63
PrkdcP97313 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms