Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cks1bP61025 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cks1bP61025 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.71□□□□□ -0.53
Cks1bP61025 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.71□□□□□ -0.53
Cks1bP61025 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cks1bP61025 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cks1bP61025 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cks1bP61025 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Cks1bP61025 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cks1bP61025 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cks1bP61025 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.71□□□□□ -0.54
Cks1bP61025 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1bP61025 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cks1bP61025 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1bP61025 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cks1bP61025 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cks1bP61025 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cks1bP61025 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.7□□□□□ -0.54
Cks1bP61025 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cks1bP61025 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.7□□□□□ -0.54
Cks1bP61025 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.7□□□□□ -0.54
Cks1bP61025 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.7□□□□□ -0.54
Cks1bP61025 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.7□□□□□ -0.54
Cks1bP61025 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.7□□□□□ -0.54
Cks1bP61025 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.7□□□□□ -0.54
Cks1bP61025 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cks1bP61025 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cks1bP61025 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.69□□□□□ -0.54
Cks1bP61025 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.69□□□□□ -0.54
Cks1bP61025 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cks1bP61025 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cks1bP61025 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cks1bP61025 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cks1bP61025 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cks1bP61025 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cks1bP61025 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms