Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.73■□□□□ 0.27
Tubgcp3P58854 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp3P58854 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.72■□□□□ 0.27
Tubgcp3P58854 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Tubgcp3P58854 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp3P58854 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Gm11336-201ENSMUST00000118168 334 ntBASIC16.71■□□□□ 0.27
Tubgcp3P58854 Gm6433-201ENSMUST00000118634 875 ntBASIC16.71■□□□□ 0.27
Tubgcp3P58854 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Gm26039-201ENSMUST00000158152 144 ntBASIC16.71■□□□□ 0.27
Tubgcp3P58854 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Tubgcp3P58854 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp3P58854 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubgcp3P58854 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubgcp3P58854 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp3P58854 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms