Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sssca1P56873 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sssca1P56873 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.27□□□□□ -0.28
Sssca1P56873 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sssca1P56873 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sssca1P56873 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sssca1P56873 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Gm18958-201ENSMUST00000174258 762 ntBASIC13.27□□□□□ -0.29
Sssca1P56873 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.27□□□□□ -0.29
Sssca1P56873 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sssca1P56873 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Sssca1P56873 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sssca1P56873 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sssca1P56873 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sssca1P56873 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.26□□□□□ -0.29
Sssca1P56873 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sssca1P56873 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.25□□□□□ -0.29
Sssca1P56873 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.25□□□□□ -0.29
Sssca1P56873 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Sssca1P56873 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.25□□□□□ -0.29
Sssca1P56873 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sssca1P56873 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sssca1P56873 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.25□□□□□ -0.29
Sssca1P56873 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.25□□□□□ -0.29
Sssca1P56873 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.25□□□□□ -0.29
Sssca1P56873 Trmt13-210ENSMUST00000198454 880 ntBASIC13.25□□□□□ -0.29
Sssca1P56873 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sssca1P56873 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.25□□□□□ -0.29
Sssca1P56873 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sssca1P56873 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Sssca1P56873 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sssca1P56873 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sssca1P56873 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.24□□□□□ -0.29
Sssca1P56873 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sssca1P56873 Gm7638-201ENSMUST00000121348 967 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms