Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Sox1P53783 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.7■□□□□ 0.26
Sox1P53783 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox1P53783 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.7■□□□□ 0.26
Sox1P53783 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.69■□□□□ 0.26
Sox1P53783 Gm22175-201ENSMUST00000175007 78 ntBASIC16.69■□□□□ 0.26
Sox1P53783 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.69■□□□□ 0.26
Sox1P53783 Gm27622-201ENSMUST00000183779 60 ntBASIC16.69■□□□□ 0.26
Sox1P53783 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.69■□□□□ 0.26
Sox1P53783 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.69■□□□□ 0.26
Sox1P53783 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sox1P53783 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.69■□□□□ 0.26
Sox1P53783 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox1P53783 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Sox1P53783 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.68■□□□□ 0.26
Sox1P53783 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox1P53783 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Sox1P53783 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Sox1P53783 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Gm45167-201ENSMUST00000208007 322 ntBASIC16.68■□□□□ 0.26
Sox1P53783 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox1P53783 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sox1P53783 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox1P53783 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Gm27646-201ENSMUST00000183989 110 ntBASIC16.67■□□□□ 0.26
Sox1P53783 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Sox1P53783 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.67■□□□□ 0.26
Sox1P53783 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox1P53783 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox1P53783 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Sox1P53783 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Gm15653-201ENSMUST00000119247 907 ntBASIC16.66■□□□□ 0.26
Sox1P53783 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.66■□□□□ 0.26
Sox1P53783 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Gm4899-201ENSMUST00000178708 719 ntBASIC16.66■□□□□ 0.26
Sox1P53783 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.66■□□□□ 0.26
Sox1P53783 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.66■□□□□ 0.26
Sox1P53783 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox1P53783 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.66■□□□□ 0.26
Sox1P53783 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sox1P53783 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox1P53783 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox1P53783 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox1P53783 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox1P53783 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms