Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GdnfP48540 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GdnfP48540 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
GdnfP48540 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.36□□□□□ -0.11
GdnfP48540 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.36□□□□□ -0.11
GdnfP48540 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GdnfP48540 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Gm12085-201ENSMUST00000119263 940 ntBASIC14.36□□□□□ -0.11
GdnfP48540 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.36□□□□□ -0.11
GdnfP48540 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.36□□□□□ -0.11
GdnfP48540 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.36□□□□□ -0.11
GdnfP48540 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.36□□□□□ -0.11
GdnfP48540 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GdnfP48540 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.36□□□□□ -0.11
GdnfP48540 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GdnfP48540 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.35□□□□□ -0.11
GdnfP48540 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GdnfP48540 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Gm24841-201ENSMUST00000158676 357 ntBASIC14.35□□□□□ -0.11
GdnfP48540 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GdnfP48540 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GdnfP48540 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
GdnfP48540 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.35□□□□□ -0.11
GdnfP48540 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GdnfP48540 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.34□□□□□ -0.11
GdnfP48540 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GdnfP48540 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GdnfP48540 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GdnfP48540 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GdnfP48540 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.33□□□□□ -0.12
GdnfP48540 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.33□□□□□ -0.12
GdnfP48540 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GdnfP48540 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms