Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Xcl1P47993 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Xcl1P47993 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.72□□□□□ -0.69
Xcl1P47993 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.72□□□□□ -0.69
Xcl1P47993 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Xcl1P47993 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Xcl1P47993 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Xcl1P47993 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Xcl1P47993 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC10.71□□□□□ -0.69
Xcl1P47993 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC10.71□□□□□ -0.69
Xcl1P47993 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Xcl1P47993 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC10.71□□□□□ -0.69
Xcl1P47993 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Xcl1P47993 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Xcl1P47993 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Xcl1P47993 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Xcl1P47993 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Xcl1P47993 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Xcl1P47993 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Xcl1P47993 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Xcl1P47993 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Xcl1P47993 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Xcl1P47993 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.7□□□□□ -0.7
Xcl1P47993 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.7□□□□□ -0.7
Xcl1P47993 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Xcl1P47993 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC10.7□□□□□ -0.7
Xcl1P47993 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Xcl1P47993 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.7□□□□□ -0.7
Xcl1P47993 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Xcl1P47993 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Xcl1P47993 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Tfap2a-209ENSMUST00000225180 1828 ntBASIC10.7□□□□□ -0.7
Xcl1P47993 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Xcl1P47993 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.69□□□□□ -0.7
Xcl1P47993 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Xcl1P47993 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Xcl1P47993 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Xcl1P47993 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC10.69□□□□□ -0.7
Xcl1P47993 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC10.69□□□□□ -0.7
Xcl1P47993 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Xcl1P47993 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Xcl1P47993 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms