Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cxcl12P40224 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl12P40224 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cxcl12P40224 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cxcl12P40224 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Cxcl12P40224 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.83■□□□□ 0.28
Cxcl12P40224 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.83■□□□□ 0.28
Cxcl12P40224 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.83■□□□□ 0.28
Cxcl12P40224 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.83■□□□□ 0.28
Cxcl12P40224 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.83■□□□□ 0.28
Cxcl12P40224 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl12P40224 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.83■□□□□ 0.28
Cxcl12P40224 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cxcl12P40224 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl12P40224 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.82■□□□□ 0.28
Cxcl12P40224 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl12P40224 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.82■□□□□ 0.28
Cxcl12P40224 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cxcl12P40224 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Cxcl12P40224 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.82■□□□□ 0.28
Cxcl12P40224 Gm5682-201ENSMUST00000173402 505 ntBASIC16.82■□□□□ 0.28
Cxcl12P40224 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Gm27646-201ENSMUST00000183989 110 ntBASIC16.82■□□□□ 0.28
Cxcl12P40224 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.82■□□□□ 0.28
Cxcl12P40224 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl12P40224 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl12P40224 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cxcl12P40224 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cxcl12P40224 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 AA543401-201ENSMUST00000164248 1269 ntBASIC16.81■□□□□ 0.28
Cxcl12P40224 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.81■□□□□ 0.28
Cxcl12P40224 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.81■□□□□ 0.28
Cxcl12P40224 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cxcl12P40224 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cxcl12P40224 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl12P40224 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Gm13616-201ENSMUST00000120600 222 ntBASIC16.8■□□□□ 0.28
Cxcl12P40224 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Gm45167-201ENSMUST00000208007 322 ntBASIC16.8■□□□□ 0.28
Cxcl12P40224 Gm18622-201ENSMUST00000219361 595 ntBASIC16.8■□□□□ 0.28
Cxcl12P40224 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms