Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Timp3P39876 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Timp3P39876 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Timp3P39876 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Timp3P39876 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Timp3P39876 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Timp3P39876 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Gm27000-201ENSMUST00000182943 842 ntBASIC13.41□□□□□ -0.26
Timp3P39876 Gm27357-201ENSMUST00000183754 135 ntBASIC13.41□□□□□ -0.26
Timp3P39876 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.41□□□□□ -0.26
Timp3P39876 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Timp3P39876 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Timp3P39876 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.4□□□□□ -0.26
Timp3P39876 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Timp3P39876 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.4□□□□□ -0.26
Timp3P39876 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Timp3P39876 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Timp3P39876 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.4□□□□□ -0.26
Timp3P39876 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.4□□□□□ -0.26
Timp3P39876 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Timp3P39876 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Timp3P39876 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.39□□□□□ -0.27
Timp3P39876 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Timp3P39876 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.39□□□□□ -0.27
Timp3P39876 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.39□□□□□ -0.27
Timp3P39876 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.39□□□□□ -0.27
Timp3P39876 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Timp3P39876 Gm27742-201ENSMUST00000184667 60 ntBASIC13.39□□□□□ -0.27
Timp3P39876 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.39□□□□□ -0.27
Timp3P39876 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Timp3P39876 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Timp3P39876 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Timp3P39876 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Timp3P39876 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.38□□□□□ -0.27
Timp3P39876 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Timp3P39876 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms