Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.78□□□□□ -0.36
Ccl6P27784 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl6P27784 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccl6P27784 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl6P27784 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl6P27784 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccl6P27784 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccl6P27784 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.78□□□□□ -0.36
Ccl6P27784 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl6P27784 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl6P27784 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl6P27784 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccl6P27784 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ccl6P27784 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.77□□□□□ -0.36
Ccl6P27784 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl6P27784 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl6P27784 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl6P27784 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.77□□□□□ -0.36
Ccl6P27784 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccl6P27784 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ccl6P27784 Gm16061-201ENSMUST00000122167 857 ntBASIC12.77□□□□□ -0.37
Ccl6P27784 Gm18959-201ENSMUST00000208954 655 ntBASIC12.77□□□□□ -0.37
Ccl6P27784 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ccl6P27784 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccl6P27784 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccl6P27784 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccl6P27784 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl6P27784 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccl6P27784 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccl6P27784 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Ccl6P27784 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccl6P27784 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccl6P27784 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccl6P27784 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.76□□□□□ -0.37
Ccl6P27784 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl6P27784 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccl6P27784 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccl6P27784 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccl6P27784 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ccl6P27784 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccl6P27784 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccl6P27784 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccl6P27784 Gm13474-201ENSMUST00000122466 815 ntBASIC12.75□□□□□ -0.37
Ccl6P27784 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccl6P27784 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms