Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.99■□□□□ 0.63
Pde6aP27664 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.99■□□□□ 0.63
Pde6aP27664 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.99■□□□□ 0.63
Pde6aP27664 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Pde6aP27664 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.99■□□□□ 0.63
Pde6aP27664 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pde6aP27664 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pde6aP27664 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.98■□□□□ 0.63
Pde6aP27664 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.98■□□□□ 0.63
Pde6aP27664 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.98■□□□□ 0.63
Pde6aP27664 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pde6aP27664 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pde6aP27664 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pde6aP27664 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Pde6aP27664 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pde6aP27664 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Pde6aP27664 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.97■□□□□ 0.63
Pde6aP27664 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pde6aP27664 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Pde6aP27664 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.97■□□□□ 0.63
Pde6aP27664 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.97■□□□□ 0.63
Pde6aP27664 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pde6aP27664 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Pde6aP27664 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.97■□□□□ 0.63
Pde6aP27664 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pde6aP27664 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.96■□□□□ 0.63
Pde6aP27664 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pde6aP27664 Gm14859-201ENSMUST00000117752 357 ntBASIC18.96■□□□□ 0.63
Pde6aP27664 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pde6aP27664 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Pde6aP27664 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Pde6aP27664 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pde6aP27664 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pde6aP27664 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.96■□□□□ 0.63
Pde6aP27664 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pde6aP27664 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pde6aP27664 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pde6aP27664 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pde6aP27664 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.95■□□□□ 0.62
Pde6aP27664 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.95■□□□□ 0.62
Pde6aP27664 Gm7367-201ENSMUST00000057611 492 ntBASIC18.95■□□□□ 0.62
Pde6aP27664 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pde6aP27664 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pde6aP27664 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.94■□□□□ 0.62
Pde6aP27664 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pde6aP27664 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.94■□□□□ 0.62
Pde6aP27664 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms