Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cbx3P23198 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cbx3P23198 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Cbx3P23198 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.98□□□□□ -0.01
Cbx3P23198 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cbx3P23198 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cbx3P23198 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Gm13146-201ENSMUST00000118508 780 ntBASIC14.98□□□□□ -0.01
Cbx3P23198 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.98□□□□□ -0.01
Cbx3P23198 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.98□□□□□ -0.01
Cbx3P23198 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.98□□□□□ -0.01
Cbx3P23198 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cbx3P23198 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cbx3P23198 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.97□□□□□ -0.01
Cbx3P23198 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Phf7-203ENSMUST00000226565 1971 ntBASIC14.97□□□□□ -0.01
Cbx3P23198 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cbx3P23198 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.97□□□□□ -0.01
Cbx3P23198 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cbx3P23198 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.96□□□□□ -0.01
Cbx3P23198 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Cbx3P23198 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Cbx3P23198 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.96□□□□□ -0.01
Cbx3P23198 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.96□□□□□ -0.01
Cbx3P23198 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cbx3P23198 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cbx3P23198 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Cbx3P23198 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.96□□□□□ -0.02
Cbx3P23198 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cbx3P23198 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cbx3P23198 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cbx3P23198 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.95□□□□□ -0.02
Cbx3P23198 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.95□□□□□ -0.02
Cbx3P23198 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.95□□□□□ -0.02
Cbx3P23198 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cbx3P23198 Gm13534-201ENSMUST00000121169 513 ntBASIC14.95□□□□□ -0.02
Cbx3P23198 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.95□□□□□ -0.02
Cbx3P23198 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.95□□□□□ -0.02
Cbx3P23198 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.95□□□□□ -0.02
Cbx3P23198 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.95□□□□□ -0.02
Cbx3P23198 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Gm10493-201ENSMUST00000097270 612 ntBASIC14.95□□□□□ -0.02
Cbx3P23198 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.95□□□□□ -0.02
Cbx3P23198 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cbx3P23198 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms