Protein–RNA interactions for Protein: P09690

Chrnb1, Acetylcholine receptor subunit beta, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb1P09690 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chrnb1P09690 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chrnb1P09690 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
Chrnb1P09690 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chrnb1P09690 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chrnb1P09690 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chrnb1P09690 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chrnb1P09690 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chrnb1P09690 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Chrnb1P09690 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.69□□□□□ -0.06
Chrnb1P09690 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Chrnb1P09690 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.69□□□□□ -0.06
Chrnb1P09690 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.69□□□□□ -0.06
Chrnb1P09690 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.69□□□□□ -0.06
Chrnb1P09690 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.69□□□□□ -0.06
Chrnb1P09690 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Chrnb1P09690 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.69□□□□□ -0.06
Chrnb1P09690 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chrnb1P09690 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chrnb1P09690 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.68□□□□□ -0.06
Chrnb1P09690 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.68□□□□□ -0.06
Chrnb1P09690 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.68□□□□□ -0.06
Chrnb1P09690 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.68□□□□□ -0.06
Chrnb1P09690 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.68□□□□□ -0.06
Chrnb1P09690 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chrnb1P09690 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chrnb1P09690 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Chrnb1P09690 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.67□□□□□ -0.06
Chrnb1P09690 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Chrnb1P09690 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chrnb1P09690 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Chrnb1P09690 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Gm37856-201ENSMUST00000191634 999 ntBASIC14.67□□□□□ -0.06
Chrnb1P09690 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.67□□□□□ -0.06
Chrnb1P09690 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.67□□□□□ -0.06
Chrnb1P09690 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Chrnb1P09690 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.67□□□□□ -0.06
Chrnb1P09690 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chrnb1P09690 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Chrnb1P09690 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms