Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PrnpP04925 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PrnpP04925 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PrnpP04925 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PrnpP04925 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PrnpP04925 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
PrnpP04925 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.95■□□□□ 0.3
PrnpP04925 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PrnpP04925 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.95■□□□□ 0.3
PrnpP04925 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PrnpP04925 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PrnpP04925 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.94■□□□□ 0.3
PrnpP04925 Gm7222-201ENSMUST00000117512 906 ntBASIC16.94■□□□□ 0.3
PrnpP04925 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PrnpP04925 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.94■□□□□ 0.3
PrnpP04925 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.94■□□□□ 0.3
PrnpP04925 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.94■□□□□ 0.3
PrnpP04925 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PrnpP04925 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PrnpP04925 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PrnpP04925 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PrnpP04925 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.93■□□□□ 0.3
PrnpP04925 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.93■□□□□ 0.3
PrnpP04925 Gm12260-201ENSMUST00000122447 411 ntBASIC16.93■□□□□ 0.3
PrnpP04925 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.93■□□□□ 0.3
PrnpP04925 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.93■□□□□ 0.3
PrnpP04925 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.93■□□□□ 0.3
PrnpP04925 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PrnpP04925 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PrnpP04925 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.93■□□□□ 0.3
PrnpP04925 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PrnpP04925 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.92■□□□□ 0.3
PrnpP04925 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PrnpP04925 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PrnpP04925 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Gm13036-201ENSMUST00000117799 748 ntBASIC16.92■□□□□ 0.3
PrnpP04925 Gm14140-201ENSMUST00000119999 995 ntBASIC16.92■□□□□ 0.3
PrnpP04925 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.92■□□□□ 0.3
PrnpP04925 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PrnpP04925 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PrnpP04925 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.92■□□□□ 0.3
PrnpP04925 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrnpP04925 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PrnpP04925 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PrnpP04925 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrnpP04925 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PrnpP04925 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PrnpP04925 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.91■□□□□ 0.3
PrnpP04925 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrnpP04925 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PrnpP04925 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms