Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Matn4O89029 Gm44450-201ENSMUST00000199528 114 ntBASIC15.47■□□□□ 0.07
Matn4O89029 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.47■□□□□ 0.07
Matn4O89029 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Matn4O89029 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Matn4O89029 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Matn4O89029 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Matn4O89029 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Matn4O89029 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.46■□□□□ 0.07
Matn4O89029 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.46■□□□□ 0.07
Matn4O89029 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Matn4O89029 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.46■□□□□ 0.07
Matn4O89029 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Matn4O89029 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.46■□□□□ 0.06
Matn4O89029 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Matn4O89029 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Matn4O89029 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Matn4O89029 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Matn4O89029 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Matn4O89029 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Matn4O89029 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Matn4O89029 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.45■□□□□ 0.06
Matn4O89029 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Matn4O89029 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.45■□□□□ 0.06
Matn4O89029 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Matn4O89029 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Matn4O89029 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.45■□□□□ 0.06
Matn4O89029 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Matn4O89029 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Matn4O89029 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Gm36967-201ENSMUST00000193814 266 ntBASIC15.44■□□□□ 0.06
Matn4O89029 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.44■□□□□ 0.06
Matn4O89029 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Matn4O89029 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.44■□□□□ 0.06
Matn4O89029 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Matn4O89029 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms