Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Hcn3O88705 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn3O88705 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn3O88705 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn3O88705 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.71■□□□□ 0.1
Hcn3O88705 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn3O88705 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn3O88705 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn3O88705 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn3O88705 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.7■□□□□ 0.1
Hcn3O88705 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hcn3O88705 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hcn3O88705 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.7■□□□□ 0.1
Hcn3O88705 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.7■□□□□ 0.1
Hcn3O88705 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.7■□□□□ 0.1
Hcn3O88705 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Gm22240-201ENSMUST00000175225 82 ntBASIC15.7■□□□□ 0.1
Hcn3O88705 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.7■□□□□ 0.1
Hcn3O88705 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.7■□□□□ 0.1
Hcn3O88705 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Hcn3O88705 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn3O88705 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
Hcn3O88705 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.69■□□□□ 0.1
Hcn3O88705 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.69■□□□□ 0.1
Hcn3O88705 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Gm15378-201ENSMUST00000121894 207 ntBASIC15.69■□□□□ 0.1
Hcn3O88705 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Hcn3O88705 Gm18025-201ENSMUST00000221733 862 ntBASIC15.69■□□□□ 0.1
Hcn3O88705 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hcn3O88705 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.68■□□□□ 0.1
Hcn3O88705 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hcn3O88705 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hcn3O88705 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Gm10698-201ENSMUST00000182663 604 ntBASIC15.68■□□□□ 0.1
Hcn3O88705 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.68■□□□□ 0.1
Hcn3O88705 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hcn3O88705 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hcn3O88705 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hcn3O88705 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hcn3O88705 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hcn3O88705 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.67■□□□□ 0.1
Hcn3O88705 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.67■□□□□ 0.1
Hcn3O88705 Gm42545-201ENSMUST00000202755 922 ntBASIC15.67■□□□□ 0.1
Hcn3O88705 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hcn3O88705 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms