Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Becn1O88597 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Gm2399-201ENSMUST00000104944 225 ntBASIC18.81■□□□□ 0.6
Becn1O88597 Gm10653-202ENSMUST00000139570 835 ntBASIC18.81■□□□□ 0.6
Becn1O88597 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.81■□□□□ 0.6
Becn1O88597 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.81■□□□□ 0.6
Becn1O88597 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Becn1O88597 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
Becn1O88597 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Becn1O88597 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.8■□□□□ 0.6
Becn1O88597 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Becn1O88597 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.8■□□□□ 0.6
Becn1O88597 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Becn1O88597 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Becn1O88597 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.79■□□□□ 0.6
Becn1O88597 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.79■□□□□ 0.6
Becn1O88597 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Becn1O88597 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.79■□□□□ 0.6
Becn1O88597 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Becn1O88597 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Asic1-205ENSMUST00000228185 1818 ntBASIC18.79■□□□□ 0.6
Becn1O88597 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.79■□□□□ 0.6
Becn1O88597 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Becn1O88597 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Becn1O88597 Gm37856-201ENSMUST00000191634 999 ntBASIC18.78■□□□□ 0.6
Becn1O88597 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.78■□□□□ 0.6
Becn1O88597 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Becn1O88597 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Becn1O88597 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.78■□□□□ 0.6
Becn1O88597 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Becn1O88597 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.78■□□□□ 0.6
Becn1O88597 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.77■□□□□ 0.6
Becn1O88597 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 Dio3-201ENSMUST00000097228 1449 ntBASIC18.77■□□□□ 0.6
Becn1O88597 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Becn1O88597 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.77■□□□□ 0.6
Becn1O88597 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Becn1O88597 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.77■□□□□ 0.6
Becn1O88597 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.77■□□□□ 0.6
Becn1O88597 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms