Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cldn1O88551 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn1O88551 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Gm13186-201ENSMUST00000118031 316 ntBASIC14.01□□□□□ -0.17
Cldn1O88551 Gm11779-201ENSMUST00000118541 368 ntBASIC14.01□□□□□ -0.17
Cldn1O88551 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.01□□□□□ -0.17
Cldn1O88551 Gm10060-201ENSMUST00000212002 111 ntBASIC14.01□□□□□ -0.17
Cldn1O88551 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.01□□□□□ -0.17
Cldn1O88551 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn1O88551 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn1O88551 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn1O88551 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn1O88551 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn1O88551 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn1O88551 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14□□□□□ -0.17
Cldn1O88551 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Gm6190-201ENSMUST00000220683 1374 ntBASIC14□□□□□ -0.17
Cldn1O88551 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Gm43575-201ENSMUST00000196420 516 ntBASIC14□□□□□ -0.17
Cldn1O88551 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14□□□□□ -0.17
Cldn1O88551 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn1O88551 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn1O88551 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn1O88551 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Idnk-204ENSMUST00000226010 1898 ntBASIC13.99□□□□□ -0.17
Cldn1O88551 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Gm27000-201ENSMUST00000182943 842 ntBASIC13.99□□□□□ -0.17
Cldn1O88551 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cldn1O88551 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn1O88551 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn1O88551 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.99□□□□□ -0.17
Cldn1O88551 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn1O88551 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.98□□□□□ -0.17
Cldn1O88551 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.98□□□□□ -0.17
Cldn1O88551 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Cldn1O88551 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Cldn1O88551 Rprl3-201ENSMUST00000157400 290 ntBASIC13.98□□□□□ -0.17
Cldn1O88551 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Cldn1O88551 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn1O88551 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Mir8112-201ENSMUST00000184382 131 ntBASIC13.98□□□□□ -0.17
Cldn1O88551 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn1O88551 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms