Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cops3O88543 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cops3O88543 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cops3O88543 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cops3O88543 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cops3O88543 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cops3O88543 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.68□□□□□ -0.06
Cops3O88543 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Mir1199-201ENSMUST00000117015 119 ntBASIC14.68□□□□□ -0.06
Cops3O88543 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.68□□□□□ -0.06
Cops3O88543 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.68□□□□□ -0.06
Cops3O88543 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cops3O88543 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.68□□□□□ -0.06
Cops3O88543 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cops3O88543 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cops3O88543 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Cops3O88543 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cops3O88543 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Gm10653-202ENSMUST00000139570 835 ntBASIC14.67□□□□□ -0.06
Cops3O88543 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.67□□□□□ -0.06
Cops3O88543 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cops3O88543 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cops3O88543 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.66□□□□□ -0.06
Cops3O88543 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.66□□□□□ -0.06
Cops3O88543 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cops3O88543 Gm15039-201ENSMUST00000118914 875 ntBASIC14.66□□□□□ -0.06
Cops3O88543 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cops3O88543 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cops3O88543 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cops3O88543 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cops3O88543 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms